PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P21220_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 279aa    MW: 31801.2 Da    PI: 9.2339
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P21220_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52e-12217261755
                            HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            + Er RR ri +++  L++l+P+     +k  s a++L +A+e+Ik+Lq
  GSMUA_Achr6P21220_001 217 ISERERRTRISEKLKSLQDLVPNM----DKQTSTADMLDLAIEHIKELQ 261
                            78*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.046210260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.72E-17213274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.27E-13214265No hitNo description
Gene3DG3DSA:4.10.280.104.1E-16215275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-14216266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-10217261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MYIYIYIYIY IHTYIYIYRH TYIYIVYIKY CTQNKNPNFA RLPHWVMDHP IVVTRFVQGP  60
ALKGFSALRD IRSFSRPGIG GVNEMASRRL KSQLSFSGTG QPSQVSQIGI PEIGDNVGCS  120
NNSDVRSGSV SQSYISSNFS IGSWDDTNSI IFSAPSSKRA KDNNGDIITM SNIESQCSLP  180
STTLEMDTMD KYLQFQHDQV PFKVRAKRGC ATHPRSISER ERRTRISEKL KSLQDLVPNM  240
DKQTSTADML DLAIEHIKEL QSQLQVLKQE QENCKCKKA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009405556.11e-156PREDICTED: transcription factor bHLH128-like isoform X1
SwissprotQ8H1022e-50BH128_ARATH; Transcription factor bHLH128
TrEMBLM0T8X00.0M0T8X0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P21220_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70713752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.15e-41bHLH family protein